BAC annotations available for viewing in GBrowse

Notes on BAC annotation pipeline and on the available GBrowse tracks


Solanum lycopersicum

Solanum tuberosum
1338 sequences downloaded from GenBank:
     HTGS Phase 3 = 900
    HTGS Phase 2 = 212
    HTGS Phase 1 = 227
1354 sequences downloaded from GenBank:
     HTGS Phase 3 = 49
    HTGS Phase 2 = 18
    HTGS Phase 1 = 1288
 

GenBanK SGN BAC ID CONVERTER

Convert BAC identifiers from GenBank to SGN and viceversa.
Please, insert one or more BAC identifiers, or a part of it, separeted by semicolon.

GenBanK PGSC BAC ID CONVERTER

Convert BAC identifiers from GenBank to RH and viceversa.
Please, insert one or more BAC identifiers, or a part of it, separeted by semicolon.
 
GenBank IDs: (e.g. AC209512;AC211038;AC193780;AC193781)

SGN IDs: (e.g. C10SLe0045H11;C10HBa0115K16;C06HBa0073H07)

GenBank IDs:(e.g. AC238065;AC238036;AC238021;AC238020)

PGSC IDs: (e.g. RH185C17;RH173H12;RH162P07;RH160N05)

 

At the present, there are two ways to access tomato and potato BAC-based genomes:
by chromosome
by feature